Adding variables after combineTCR() or combineBCR()

Source: R/addVariable.R

This function adds variables to the product of combineTCR(), or combineBCR() to be used in later visualizations. For each element, the function will add a column (labeled by variable.name) with the variable. The length of the variables parameter needs to match the length of the combined object.

addVariable(input.data, variable.name = NULL, variables = NULL)

Arguments

input.data

The product of combineTCR() or combineBCR().

variable.name

The new column name/header.

variables

The exact values to add to each element of the list.

Value

input.data list with the variable column added to each element.

Examples

combined <- combineTCR(contig_list, 
                       samples = c("P17B", "P17L", "P18B", "P18L", 
                                    "P19B","P19L", "P20B", "P20L"))
combined <- addVariable(combined, 
                        variable.name = "Type", 
                        variables = rep(c("B", "L"), 4))