scRepertoire requires R version 4.1 or greater and highly recommend installing R Studio.

Release Notes

A full copy of the changes in each version can be found in the NEWS/ChangeLog.

GitHub Branches

scRepertoire is an active project, that receives a number of changes based on user feedback, the most up-to-date versions are available via the GitHub repositories. These versions can be installed using devtools::install_github() or remotes::install_github(). The dev version is the active development branch and might be less stable than the main branch or bioconductor versions.

devtools::install_github(repo = "ncborcherding/scRepertoire")

remotes::install_github(repo = "ncborcherding/scRepertoire", ref = "dev")

Bioconductor

The current version of scRepertoire is also available in the development version of Bioconductor. Important to note, the version is listed as 1.99.1 on Bioconductor per their version guidelines.

BiocManager::install(version='devel')

BiocManager::install("scRepertoire")