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Repertoire
bHIVE
B-cell Hybrid Immune Virtual Evolution model for artificial immune system simulation
Code
dandelionR
Single-cell immune repertoire trajectory analysis in R
Code
immReferent
Reference interface to IMGT and OGRDB for immune receptor and HLA sequences
Code
immApex
Tools for adaptive immune receptor sequence-based machine and deep learning
Code
Ibex
Autoencoder for single-cell BCR
PDF
Code
scRepertoire v2
A toolkit for single-cell immune profiling
Code
Trex
Autoencoder for single-cell TCR
Code
Utility
Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCRs
Code
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