Somatic Hypermutation Is an Optimizer15 June 2026·1632 words·8 minsFrom random noise to Adam. The immune system’s mutation engine maps onto the search algorithms we already use.
The Immune System Was the Original Learning Machine. Why Don't Our Algorithms Act Like It?30 April 2026·2439 words·12 minsRevisiting Artificial Immune Systems through the lens of modern immunology and what we get out of doing it.
TCRpheno4 August 2023·628 words·3 minsApplying TCRpheno to score latent cell-fate information from TCR sequences within single-cell objects using scRepertoire.
Binary Genetics31 January 2023·483 words·3 minsGenerative art from a gene coding sequence: pulling BRCA1 with biomaRt and rendering its bases as a binary mosaic in R.